Intestinal Microbiota in Large Yellow Croaker,Larimichthys crocea,at Different Ages

The polymerase chain reaction–denaturing gradient gel electrophoresis (PCR‐DGGE) of 16S ribosomal RNA gene was used to investigate bacterial communities in the intestines of large yellow croaker at six different ages (12 d, 18 d, 26 d, 40 d, 3 mo, and 1 yr old) as well as within the corresponding feed and culture water. In addition, Illumina Miseq sequencing was utilized to compare intestinal microbiota between 12‐d‐old and 1‐yr‐old individuals. PCR‐DGGE results revealed that the culture water had the highest bacterial diversity, followed by the feed, while the intestines had the lowest diversity. The intestinal microbiota at six ages changed severely; however, the change did not follow any trend. The large yellow croaker intestines harbored specific bacterial communities that differed from those in both feed and water. Illumina Miseq sequencing results revealed that the diversity of intestinal bacteria in 12‐d‐old fish was higher than that in 1‐yr‐old fish, and the bacterial composition differed significantly between them. γ‐Proteobacteria and Pseudoalteromonas supplied the most abundant phylum and genus in the 12‐d‐old fish intestine. However, in the 1‐yr‐old fish intestine, Firmicutes and Clostridium were the most dominant, respectively. The study may contribute to a better understanding of gut microbiota and dynamics of the large yellow croaker and the relationship with their surrounding environment.     

terraGIS – a web GIS for delivery of digital soil maps in cotton‐growing areas of Australia

Effective management of soil requires the spatial distribution of its various physical, chemical and hydrological properties. This is because properties, for example clay content, determine the ability of soil to hold cations and retain water. However, data acquisition is labour intensive and time‐consuming. To add value to the limited soil data, remote sensing (e.g. airborne gamma‐ray spectrometry) and proximal sensing, such as electromagnetic (EM) induction, are being used as ancillary data. Here, we provide examples of developing Digital Soil Maps (DSM) of soil physical, chemical and hydrological properties, for seven cotton‐growing areas of southeastern Australia, by coupling soil data with remote and proximal sensed ancillary data. A greater challenge is how to get these DSM to a stakeholder in a way that is useful for practical soil use and management. This study describes how we facilitate access to the DSMs, using a simple‐to‐use web GIS platform, called terraGIS. The platform is underpinned by Google Maps API, which is an open‐source development environment for building spatially enabled Internet applications. In conclusion, we consider that terraGIS and the supporting information, available on the sister web page ( http://www.terragis.bees.unsw.edu.au/ ), allow easy access to explanation of DSM of soil properties, which are relevant to cotton growers, farm managers, consultants, extension staff, researchers, state and federal government agency personnel and policy analysts. Future work should be aimed at developing error budget maps to identify where additional soil and/or ancillary data is required to improve the accuracy of the DSMs.     

Characterization of Collagen Enzymatic Hydrolysates Derived from Lizardfish (Synodus fuscus) Scales

Acid soluble collagen was extracted from the scales of lizardfish and characterized with sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and amino acid analysis. After 8 h of collagen hydrolysis, hydrolysates had an estimated degree of hydrolysis (DH) from 4 ± 0.05 to 25 ± 0.63% (p < 0.05). All hydrolysates had angiotensin converting enzyme inhibitory and antioxidant activity. These activity levels showed little change after treatment with gastrointestinal proteases. Results indicated that the lizardfish by-products may be improved by enzymatic treatment with acid-soluble collagen from lizardfish scales.     

Growth performance and whole‐body composition of yellow catfish (Pelteobagrus fulvidraco Richardson) under feeding restriction

Fish growth is an important index in aquaculture practice. However, the effect of growth under restricted feeding on quality of fish grown to the same size remains poorly unknown. In this study, yellow catfish were reared by feeding them at three different feeding rates such as low (FR‐L group), medium (FR‐M group) and high (apparent satiation) ration levels for 82, 58 and 34 days to reach the same size, respectively. After this period, the growth performance, whole‐body amino acid composition and fatty acid profile of the fish were evaluated. Feeding restriction led to significant decreases in specific growth rate and feed conversion efficiency. Significant increases in dry matter, protein and energy contents were observed in fish under both restricted feeding treatments. FR‐L‐treated fish had significantly lower whole‐body essential amino acid contents, and significantly higher Ala and non‐essential amino acid contents compared to fish fed to satiation. Fish in restricted feeding treatments had significantly higher n‐3 PUFA and n‐3/n‐6 ratio compared to the fish fed to satiation. The present results indicate that from a quality perspective, there are certain advantages in improvement of whole‐body composition and enrichment of n‐3 PUFA associated with the restricted feeding of yellow catfish at slow growth rate.     

不同品种藜麦苗期对海拔变化的生理响应

为研究不同品种藜麦幼苗对海拔梯度变化的生理响应机制,本试验以4个藜麦品种—‘陇藜1号’、‘陇藜2号’、‘陇藜3号’及‘陇藜4号’为材料,选取甘南州临潭县3个不同海拔(2380 m,2580 m,2780 m)分布区为试验地。通过测定幼苗生物量及生理生化指标,分析不同藜麦品种幼苗在不同海拔试验区的生理响应机制,为建立藜麦品种和环境相适宜的评价体系提供参考依据。结果表明,随海拔升高,藜麦叶片叶绿素、可溶性蛋白以及抗坏血酸过氧化物酶(APX)含量逐渐降低,海拔2780 m最低;超氧化物歧化酶(SOD)、过氧化氢酶(CAT)和过氧化物酶(POD)逐渐升高,在海拔2780 m达到最大值;超氧阴离子(O2·-)产生速率呈现先升高后降低的趋势。不同藜麦品种幼苗生物量随着海拔的升高逐渐降低。说明高海拔下太阳辐射强度增大、温度降低,导致藜麦幼苗植株抗氧化酶活性升高以清除多余活性氧(ROS)自由基,使得植株能够适应高海拔环境而正常生长,但生物量较低海拔仍有降低。因此,不同品种藜麦在低海拔地区受到的胁迫较低,虽然在高海拔区域胁迫加剧,但藜麦幼苗可以正常生长并进行干物质的积累。     

利用重组自交系高密度遗传图谱定位水稻芽期耐冷QTL

为定位水稻芽期耐冷QTL,本实验以双季超级稻品种‘五丰优T025’的双亲‘五丰B’和‘昌恢T025’杂交衍生的重组自交系(recombinant inbred lines, RILs)群体为材料,对10℃低温处理的水稻幼芽的存活率、根数、根长和芽长进行了测定。利用QTL Icimapping v4.2软件,共检测到3个控制芽期耐冷性QTL：qRL1、qRL2和qBL6,分别位于第1、2、6染色体上,LOD值分别为2.98,2.51和5.26,分别解释表型变异的10.54%,8.67%和14.04%,其增效等位基因均来自于亲本‘昌恢T025’。这些QTL定位在6.75k~40.05 kb染色体区间,为后续利用这些QTL进行分子标记辅助,选育芽期耐冷籼稻新品种奠定了基础。此外,检测到13对影响水稻芽期耐冷上位性互作QTL,分布在所有12条染色体,其中第3染色体与第8染色体之间互作位点可解释的表型变异率达到21.77%,表明上位性互作QTL在调控水稻芽期耐冷过程中也发挥了重要作用。     

森林土壤动物生态功能研究进展

森林土壤动物是森林土壤生态系统中不可分割的重要组成部分，对森林土壤生态系统的物质循环和能量流动起着重要作用。文中综述了近10年森林土壤动物生态功能的相关研究进展，包括森林土壤动物对土壤理化性质、微生物、植物的影响以及外来土壤动物入侵对土壤生态系统的影响等；展望了我国森林土壤动物的未来研究方向，未来研究应多关注森林土壤动物生态功能的作用机制、森林土壤动物对全球变化的响应、外来土壤动物入侵对森林生态系统的影响、森林土壤动物种类的研究范围以及新技术的应用，以期为我国森林土壤动物生态功能、土壤动物与生态系统、可持续利用土壤动物等领域研究提供科学参考。     

一种新型卷积神经网络植物叶片识别方法

为提高植物叶片识别的准确率及减少计算代价,在Pytorch框架下提出一种融合了深度卷积生成式对抗网络(DCGAN)和迁移学习(TL)的新型卷积神经网络叶片识别方法。首先,对植物叶片图像进行预处理,通过DCGAN对样本数据库扩充;其次,利用迁移学习将Inception v3模型应用于图像数据处理上,以提高植物叶片识别的准确率;最后,通过对比实验对该方法的有效性进行验证。结果表明:该方法可以获得96.57%的植物叶片识别精度,同时参数训练的迭代次数由4000次缩短到560次。     

猕猴桃根结线虫形态观察与病原鉴定

[目的]明确贵州猕猴桃根结线虫的种类,为猕猴桃根结线虫病的防治提供理论依据.[方法]从贵州省修文、息烽和大方县采集感染根结线虫的猕猴桃植株,利用改良的贝曼漏斗法分离根结线虫,采用显微镜和扫描电镜对猕猴桃根结线虫进行形态观察与测量,结合分子生物学方法对线虫进行鉴定.[结果]猕猴桃根系被根结线虫侵染后产生根结或瘤状物,形成大小不等的根瘤,直径为0.5~1.0 cm;直径1.5~2.0 mm的须根受害较重,被侵染的须根产生单个或串生结节状肿瘤,瘤状物呈椭圆或近球形.猕猴桃根结线虫雌虫的排泄孔至头端的距离是口针的1倍左右,口针微微向背部弯曲,唇盘呈哑铃状,侧唇与中唇和唇盘分开,分界明显;雄虫唇盘大而圆,比中唇高,中唇外围圆滑,与唇盘分界明显.猕猴桃根结线虫种群与GenBank的南方根结线虫MK784570、KP234265和KF041336等线虫的序列相似度达99%.[结论]侵染贵州省修文、息烽和大方县猕猴桃的根结线虫为南方根结线虫(Meloidogyne incognita).